BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B09SP1|AL425646
(776 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1421 1524 0.0
>3x_Contig1421
Length = 8026
Score = 1524 bits (769), Expect = 0.0
Identities = 776/777 (99%), Gaps = 1/777 (0%)
Strand = Plus / Plus
Query: 1 ctcagtcacaaagcgctagaagtggaatgcatgtttcaaattccaaaatcgatgatccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2874 ctcagtcacaaagcgctagaagtggaatgcatgtttcaaattccaaaatcgatgatccgc 2933
Query: 61 taaggttttctaaagataataatttgacattagaagccatcgatgacgactcatctcgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2934 taaggttttctaaagataataatttgacattagaagccatcgatgacgactcatctcgca 2993
Query: 121 tgtttgacccggagg-ctcgataggccaagctgaagtgaagagagcccttaaaccaagac 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2994 tgtttgacccggagggctcgataggccaagctgaagtgaagagagcccttaaaccaagac 3053
Query: 180 acgtctctatgattgctcttggagggacaattggtactggtttgtttattagtatctcag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3054 acgtctctatgattgctcttggagggacaattggtactggtttgtttattagtatctcag 3113
Query: 240 gaccgttatggaacgctggacctgttggctctttaattgcatttatgttaatcggtactt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3114 gaccgttatggaacgctggacctgttggctctttaattgcatttatgttaatcggtactt 3173
Query: 300 tagcatattcagtgacgcaatctttaggtgaaatggctacattcattccagtcacttcct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3174 tagcatattcagtgacgcaatctttaggtgaaatggctacattcattccagtcacttcct 3233
Query: 360 cattcacagtcttttcacaaagattcatttccccagcggtcggtgcagcaaatggttaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3234 cattcacagtcttttcacaaagattcatttccccagcggtcggtgcagcaaatggttaca 3293
Query: 420 tgtactggttttcatgggccattacctttgcactagaactatcaattgtaggccaaatta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3294 tgtactggttttcatgggccattacctttgcactagaactatcaattgtaggccaaatta 3353
Query: 480 ttcaatactggaccgatgccgtcccattggaggcatggatcgctatattttgggtattat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3354 ttcaatactggaccgatgccgtcccattggaggcatggatcgctatattttgggtattat 3413
Query: 540 tggtatccttcaatatgttccctgttaaatggtacggtgagtttgagttttgggttgcct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3414 tggtatccttcaatatgttccctgttaaatggtacggtgagtttgagttttgggttgcct 3473
Query: 600 ccatcaaagtcattgctatcattggattcttaatctattctctatgtatggtttgcggtg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3474 ccatcaaagtcattgctatcattggattcttaatctattctctatgtatggtttgcggtg 3533
Query: 660 ctggtccagaggggccaataggtttccgttattggagaaagcccggcccttggggtaacg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3534 ctggtccagaggggccaataggtttccgttattggagaaagcccggcccttggggtaacg 3593
Query: 720 gtataatcgctaaaaatgttaacaaggccagattcttaggttgggtgtcctcgctaa 776
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3594 gtataatcgctaaaaatgttaacaaggccagattcttaggttgggtgtcctcgctaa 3650
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4697
Number of Sequences: 1807
Number of extensions: 4697
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 776
length of database: 10,358,551
effective HSP length: 16
effective length of query: 760
effective length of database: 10,329,639
effective search space: 7850525640
effective search space used: 7850525640
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)